Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs12418192 chr11:11852892 T/C 0.000112 118 41.77 42.73 13.35 KM Plot
THYM rs12418497 chr11:11853163 T/G 0.000112 118 41.77 42.73 13.35 KM Plot
THYM rs12418865 chr11:125573569 C/T 0.000188 119 44.38 35.67 23.42 KM Plot
THYM rs12419665 chr11:67468722 G/A 6.26E-7 116 44.58 41.77 34.87 KM Plot
THYM rs12420340 chr11:11848007 C/G 0.000112 118 41.77 42.73 13.35 KM Plot
THYM rs12422131 chr11:11848425 T/G 0.000112 118 41.77 42.73 13.35 KM Plot
THYM rs12439652 chr15:94812137 A/G 6.62E-6 115 25.83 27.3 45.87 KM Plot
THYM rs12444714 chr16:71452606 C/T 0.000136 119 38.33 57.77 16.82 KM Plot
THYM rs12463548 chr2:30704981 C/A 1.29E-8 119 37.37 50.07 33.13 KM Plot
THYM rs12465894 chr2:30782953 A/G 1.29E-8 119 38.13 50.1 33.13 KM Plot
THYM rs12466071 chr2:30731996 C/G 1.4E-8 118 37.37 50.1 33.13 KM Plot
THYM rs12466818 chr2:30862980 C/T 1.38E-8 119 36.03 50.13 33.13 KM Plot
THYM rs12467017 chr2:30804252 A/T 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs12467646 chr2:30863092 C/T 1.38E-8 119 36.03 50.13 33.13 KM Plot
THYM rs12467830 chr2:30804151 T/C 1.33E-8 119 36.4 50.1 33.13 KM Plot